In the author's method, these are reinforced with marginal notes (for comprehension) and a post-reading writeup (to connect concepts). I suspect this to be significantly inferior to more in-depth note-taking, as a significant amount of information may be lost in the time between reading chapter one and finishing the book, whereas complete notes should allow for immediate relation and processing. A high quality book will be organized to assist the reader in relating concepts, and waiting until book completion to prioritize this defeats the purpose of reading a book rather than a collection of disparate articles.
Still, the author is absolutely correct in that active reading is a worthwhile habit, and you should try to find an optimal method for your learning tendencies; While for me focusing on repetition and post-read review is brutally inefficient, everyone learns differently, so it may be perfect for you.