It doesn't serve the author well to make this comparison. Saying it's less messy to manage Proton/React source code files and the associated Node/JS/etc infrastructure is an extremely dubious claim. One of the things I like best about Qt is how non-messy Qt development is. Most everything (source files, resources, etc.) lives in a well-organized project that is easily managed using the Qt Creator IDE. The project structure is well-documented and standardized.
It's also quite strange to compare React code to code using the Python binding for Qt. That's not how most Qt apps are written. Most Qt apps these days use QML, which is based on regular old JavaScript. Besides being a more accurate representation of the way Qt development is normally done, it would also be more interesting to compare one JavaScript-based framework to another. (Although I recommend not making the comparison at all, since I don't believe a fair comparison would favor Proton.)