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An option not to publish tracking for an x km radius around your "home" location would probably work.

It would also cover the military bases, since they could just pick 100km.

This is actually an existing Strava feature called Privacy Zones[1]. It doesn't explicitly say that setting up a Privacy Zone will render activities which exist entirely within those zones private or that the Global Heatmap respects privacy zones but those are reasonable assumptions.

[1] https://support.strava.com/hc/en-us/articles/115000173384-Pr...

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