If signal users can be counted on one hand, people using gpg can be counted on a finger.
Also, organising a protest isn't about keeping individual messages secret. You can never keep something secret that you want thousands or hundereds of thousands of people to know about. It's all about getting the message across fast without the government blocking it.
Email is the only reasonably decentralised and diverse messaging infrastructure we have. It's impossible to block without shutting down the entire Internet in a country.