One example are nominal techniques [1]. While they are constructive, they have so far only found substantial implementation in Isabelle/HOL [2]. The reason is that the natural implementation is non-constructive, and leads to only a small blowup in proof complexity, which can easily be handled by Isabelle/HOL's proof automation. In contrast, constructive implementations of nominal techniques seem to require a considerable blowup in logical complexity, which the existing proof automation in Curry-Howard based provers doesn't seem to handle gracefully.
Another issue is that most of the automation that is known as "hammer" is based on non-constructive automatic provers.
[1] https://www.cl.cam.ac.uk/~amp12/papers/nomlfo/nomlfo-draft.p...