After reading the Nespresso supported article: it is an observational study. The types of coffee described are not considered because the studied population does not usually drink them.
The ironic side of the study is that since expresso coffee has more cafesol than filtered coffee (but less than french press), if people start to use more their nespresso the population study would probably change.
See this: https://www.hsph.harvard.edu/nutritionsource/2015/02/23/ask-...
Quoting:
9. Is drinking coffee made with a paper filter healthier than drinking boiled coffee or other types of coffee?
Coffee contains a substance called cafestol that is a potent stimulator of LDL-cholesterol levels (12). Cafestol is found in the oily fraction of coffee, and when you brew coffee with a paper filter, the cafestol gets left behind in the filter. Other methods of coffee preparation, such as the boiled coffee common in Scandinavian countries, French press coffee, or Turkish coffee, are much higher in cafestol. So for people who have high cholesterol levels or who want to prevent having high cholesterol levels, it is better to choose paper filtered coffee or instant coffee, since they have much lower levels of cafestol than boiled or French press coffee. Espresso is somewhere in the middle; it has less cafestol than boiled or French press coffee, but more than paper filtered coffee.
Urgert R, Katan MB. The cholesterol-raising factor from coffee beans. Annu Rev Nutr. 1997;17:305-24.