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I'd like to know what makes Physics so different from Math and Chemistry. Why are the latter almost equal but Physics is just so overwhelmingly male?

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Probably just depends on what they decide to include in each category.

I can tell you that when I was studying math (2008-2013), almost all of my professors were male. But maybe "university professor" isn't the only thing they include in their data set for mathematicians, but for physics maybe it is.

AFAIK Most woman Mathematicians are school teachers.

Since this data is about occupation and not training, it seems like the "Teacher" category would skew a lot of other categories. Is a Computer Programming Teacher in the "Teacher" category or the "Computer Programming" category? Probably "Teacher" since that is their occupation. But it hides the fact that they probably have the background & skills to be a programmer but chose a different outlet to use their knowledge.

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