Maybe I'm getting this all wrong, but aren't the leaves also representing chunked data, which is compressed.
The Prometheus solution also sequentially places compressed chunks for the same series. The time slicing actually has a lot of benefits and can simply be seen as the first level of the described B+ tree. An index of chunks for a series can then be seen as the second level.
The potential read amplification here seems completely equivalent. Just from my high-level view, all properties of the read and write path seem almost identical.