* DHT/torrent hashes - A group of malicious peers could serve malware for a given hash.
* Git - A commit may be replaced by another without affecting the following commits.
* PGP/GPG -- Any old keys still in use. (New keys do not use SHA1.)
* Distribution software checksum. SHA1 is the most common digest provided (even MD5 for many).
Edit: Yes, I understand this is a collision attack. But yes, it's still a attack vector as 2 same blocks can be generated now, with one published, widely deployed (torrent/git), and then replaced at a later date.