The desktop environment itself is but a small part of the complete desktop. Some important differences between those specific desktops are are: 1) Clicking a file both runs the code and opens the file, and difference is hidden from the user. 2) Mail clients start pretty much any software automatically to open attachments. 3) Office software runs code embedded in documents with just a user prompt. 4) A lot of plugins are active by default. Flash and ActiveX used to be, but this is better now. 5) Code is run automatically on removable media insertion. 6) Users download software from random web pages instead of vetted archives.
These things are not technical but behavioral in nature and make desktops ownable. I hope the Linux desktop never emulates them. Web browsers have gotten so much better but one simple thing they could is stop downloading things automatically. That save dialog won't scare anyone, and users will stop having lots and lots of unknown files in their download directory.