1. The startup times, not so much of the JVM itself, that just takes 1,5 secs, but the startup time of your application gets higher if you have a lot of classes on the classpath. I guess it's the classpath scanning that takes a lot of time (?).
2. Memory usage of Java objects is quite heavy. See this article: http://www.ibm.com/developerworks/library/j-codetoheap/index...
3. The heavyness of the ecosystem in terms of the magnitude of concepts and tools being used and the enterprisy-ness of libraries.