The increasing majority of us don't expect any but a fraction of comments to be good. (This applies to research articles too. Sturgeon's Law.) They are like unrefined ore. Which is why we need as many as possible. Misconceptions are dangerous but they are less dangerous when brought into the light where they can be identified and corrected.
It's true that misinformation and conspiracy theories spread rapidly but, crucially, so does the correction of error, especially older and more parochial errors, which may even need to spread a bit before this can happen.
Look at places where people don't have access to the internet and you won't find an abundance of true information. Rather you'll find much less information together with cruder and more parochial misinformation such as ideas about witches and evil spirits.
So I don't think we need to worry too much about the quality of information in the comment section or any frontier of knowledge. It's mostly wrong. What is of more concern is how to guard and improve the conditions under which knowledge grows, beyond what we've already learnt (such as expelling trolls, discouraging politics, fluff).