I think you can extend the same judgement out to entire threads --- the best Reddit threads being so much better than HN's that it's hard to even imagine what HN could do differently to compete, and the median HN thread being better than the median Reddit thread.
Another interesting thing is that the comparison would probably fall apart completely if not for the heavily-moderated subreddits that produce the best comments. If the Reddit comment cohorts included only the lightly moderated subreddits, HN would probably win on all metrics other than volume and diversity of topics.