The issue of multiple meanings is that if you strongly predict an ambiguous emoji (say the prayer emoji) how do you then extrapolate what concept is contained in the sentence (e.g. was the person saying "thanks" or "high five" or "please").
[I'm also a Dango dev]
And then the t-SNE projection shown in the article is based on this same layer (one before prediction)?
And yes, we do the t-SNE on that pre-projection space. That's why we can visualize the targets (emoji) in it. We can also t-SNE the word embeddings themselves — the input to the RNN — which is also kind of interesting. It automatically learns all kinds of structures there. Chris Olah has a good post on word embeddings if you're interested: http://colah.github.io/posts/2014-07-NLP-RNNs-Representation...