You can take my word on this or not, but I'm not an asshole. I'm a decent guy whom he chose not to hire, probably for good reasons, but it would have been better to tell me what those reasons were, seeing as I was in a very tough spot (remember that recession thing?). Now I'll never work with Fog Creek in any capacity, never buy their products, and never recommend anyone to work there (although I wouldn't advise against it; I'm not vindictive).
Even if you were qualified to get a job there normally, someone could've applied that happened to wipe the floor with everyone.
Fair. I wouldn't have objected at all if he told me something to the effect of "someone else applied with more experience". That's the reality of a competitive market and I would have respected him for telling me that. Besides, if I don't get in because they're hiring these great people, then that's an incentive for me to re-apply in a few years when I am a stronger applicant and much more likely to succeed.
Regardless, the odds of you reapplying aren't that high (though he notices it), so it's simply not worth the effort - if he noticed you stood out, he would've made the effort to continue.
If he turned me down because he didn't see me as a fit for the job, or I didn't have the skills he was looking for, then that's perfectly reasonable and he could have said as much. On the other hand, if the reason he didn't take 5 minutes out of his day (or that of someone else who could do so) to explain his rationale was because he didn't think I am talented enough for doing so to be worth it, then his judgment of talent is worth less than dogshit.