Any restrictions on your ability to do work in the same industry or geography is an immediate warning for me. Its difficult to draw industry boundaries and a client could pick and choose adjunct industries at their discretion.
Anything bordering on a non-disclosure agreement is also a problem. If you are freelancing for multiple clients, the chance that you might work with a client with some overlapping concept or business model means that even being in the room might breach your contract. Large organisations might have related projects, that cause concern even if they aren't related to the work you are doing. Confidentiality agreements would be safer, I imagine.
I had an employment contract that gave the company rights to personally track or record me if required. I don't imagine they do so, and you can't relinquish your rights when violation of the law is involved. What it would allow though is the organisation to record my emails or phone history should I be breaching my independence or regulatory duties, which I feel makes sense and is a much different issue.
Either way, any alarming conditions are just something you should have them clarify in writing. I think most of the time these contracts are fairly pro-forma anyway. IANAL.
Occassionally someone says they need us to sign something and we ask why. 99% of the time the actual fear is that we'll break the law. So i just point out that since doing "x" would be against the law, they are no safer if we sign something. What written agreements do is muddy the waters because now you have to have a judge determine what the agreement says according to the law.
Good luck.