Toward the end AlphaGo was making moves that even I (as a double-digit kyu player) could recognize as really bad. However, one of the commentators made the observation that each time it did, the moves forced a highly-predictable move by Lee Sedol in response. From the point of view of a Go player, they were non-sensical because they only removed points from the board and didn't advance AlphaGo's position at all. From the point of view of a programmer, on the other hand, considering that predicting how your opponent will move has got to be one of the most challenging aspects of a Go algorithm, making a move that easily narrows and deepens the search tree makes complete sense.