"The primary command line tool is aptitude. apt-get fulfills a similar purpose and although it is no longer the recommended primary tool some still use it."
If you prefer the apt-* commands: "You can also use Wajig, for an unified and more logical command-line interface to all package management functions." (Apparently, apt is the new Wajig, except that apt doesn't automagically sudo, which Wajig did.)